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Gajewska, Joanna, 2023, "Dataset for project: Stress response in Staphylococcus aureus. Effects on entetotoxicity and methicillin resistance under stress conditions relevant to artisanal cheese production", https://doi.org/10.18150/M5LQ6Q, RepOD, V1
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The research has been conducted since 01.03.2022- in the Department of Industrial and Food Microbiology at the Faculty of Food Science of the University of Warmia and Mazury in Olsztyn.
The data were collected as part of a research project: "Stress response in Staphylococcus aureus: effects on entetotoxicity and methicillin resistance under stress conditions relevant to artisanal cheese production", funded by the National Science Center under the PRELUDIUM-20 project (project number: 2021/41/N/NZ9/00918).
The dataset includes:
A_1_main_characteristics – Raw data defining the nature of S. aureus strains from the arisanal cheese production chain in Poland. The data include MICs results of antibiotics, determination of slime production ability, biofilm production and raw data on the occurrence of genetic determinants among S. aureus strains.
A_2_raw_genomes - The collection contains the genomes of S. aureus strains in .fasta files. Sequencing was performed with a MiSeq sequencer, using paired-end technology, 2x300nt, using the MiSeq Reagent Kit v3 (600-cycle) (Illumina),
Dane zostały zebrane w ramach realizacji projektu badawczego pt.: "Odpowiedź na warunki stresowe u Staphylococcus aureus: wpływ na entetotoksyczność i metycylinooporność w warunkach stresu istotnego dla rzemieślniczej produkcji sera", finansowanego przez Narodowe Centrum Nauki w ramach projektu pt. konkursu PRELUDIUM-20 (nr projektu: 2021/41/N/NZ9/00918).
Badania prowadzone są od 01.03.2022- w Katedrze Mikrobiologii Przemysłowej i Żywności na Wydziale Nauki o Żywności Uniwersytetu Warmińsko-Mazurskiego w Olsztynie.
Zbiór danych obejmuje:
A_1_main_characteristics – dane surowe określające charakterystykę szczepów S. aureus pochodzących z łańcucha produkcji serów zagrodowych w Polsce. Dane zawierają wyniki MIC antybiotyków, określenie zdolności do wydzielania śluzu, wytwarzania biofilmu oraz surowe dane dotyczące występowania genetycznych determinant wśród szczepów S. aureus.
A_2_raw_genomes - zbiór zawiera genomy szczepów S. aureus w postaci plików .fasta. Sekwencjonowanie wykonano z użyciem sekwenatora MiSeq, w technologii sparowanych końców, 2x300nt, z użyciem kitu MiSeq Reagent Kit v3 (600-cycle) (Illumina).
staphylococcus aureus, MRSA, enterotoxins, virulence, artisanal cheeses
Gajewska, J.; Chajęcka-Wierzchowska, W.; Zadernowska, A. Occurrence and Characteristics of Staphylococcus aureus Strains along the Production Chain of Raw Milk Cheeses in Poland. Molecules 2022, 27, 6569. https://doi.org/10.3390/molecules27196569 https://doi.org/10.3390/molecules27196569 doi: 10.3390/molecules27196569
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