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Metabolic impact of pesticides on radish: 2D and 3D mass spectrometry imaging of metabolites in Raphanus sativus

Version 1.0

Krupa, Sumi, 2026, "Metabolic impact of pesticides on radish: 2D and 3D mass spectrometry imaging of metabolites in Raphanus sativus", https://doi.org/10.18150/H9GBGK, RepOD, V1

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Description

The materials include documentation of experiments on mass spectrometry imaging of Raphanus sativus taproot and stem fragment by LARAPPI/CI MSI (laser ablation remote atmospheric pressure photoionization/chemical ionization mass spectrometry imaging) and UHPLC-UHRMS (ultra-high performance liquid chromatography - ultra high resolution mass spectrometry) analysis of Raphanus sativus taproot and stem fragment extracts using the Bruker Impact II instrument in positive and negative mode.

LARAPPICI_MSI_100x_pesticides: file contains spectral and spatial data generated during the LARAPPI/CI-MSI analysis of taproot cross section of a radish cultivated with 100-times reccomended field dose of used pesticides. The data is in .d format and can be opened using an open-source R package that is freely available.

LARAPPICI_MSI_control: file contains spectral and spatial data generated during the LARAPPI/CI-MSI analysis of taproot cross section of a radish cultivated without pesticide treatment. The data is in .d format and can be opened using an open-source R package that is freely available.

NEG.zip: file contains data from UHPLC-UHRMS analysis in negative mode for each: control radish extract, field dose (Mix1x) pesticide-treated radish extract, 100-times field dose (Mix100x) pesticide-treated radish extract, 100x-metaldehyde-treated (Snacol100x) radish extract, 100x-cypermethrine-treated (Belem100x) radish extract, 100x-azoxystrobine and difenconazole-treated (Scorpion100x) radish extract, including three biological repetitions. The data can be accessed using the free OpenMS software.

POS.zip: file contains data from UHPLC-UHRMS analysis in positive mode for each: control radish extract, field dose (Mix1x) pesticide-treated radish extract, 100-times field dose (Mix100x) pesticide-treated radish extract, 100x-metaldehyde-treated (Snacol100x) radish extract, 100x-cypermethrine-treated (Belem100x) radish extract, 100x-azoxystrobine and difenconazole-treated (Scorpion100x) radish extract, including three biological repetitions. The data can be accessed using the free OpenMS software.

(2025-11)
Subject
Agricultural Sciences; Chemistry; Earth and Environmental Sciences; Engineering; Medicine, Health and Life Sciences
Keyword

laser ablation, photoionization, untargeted metabolomics, plant metabolomics, environmental stress response, UHPLC-UHRMS

CC0 Creative Commons Zero 1.0 CC0 Creative Commons Zero 1.0

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1 to 4 of 4 Files
LARAPPICI_MSI_control.zip
ZIP Archive - 2.3 GB - Feb 27, 2026 - 1 Download
MD5: e6c11f5bb1318de13f431e14b4b26abe
License: CC0 Creative Commons Zero 1.0
This file contains data generated during the LARAPPI/CI-MSI analysis of a control radish sample. The data is in .d format and can be opened using an open-source R package.
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LARAPPICI_MSI_100x_pesticides.zip
ZIP Archive - 2.8 GB - Feb 27, 2026 - 1 Download
MD5: b3b049f32719462fabf2877d83b483a6
License: CC0 Creative Commons Zero 1.0
The file contains data generated during the LARAPPI/CI-MSI analysis of a radish cultivated with 100-times reccomended field dose of pesticides. The data is in .d format and can be opened using an R package.
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NEG.zip
ZIP Archive - 3.1 GB - Feb 27, 2026 - 1 Download
MD5: df0b87b3bfbb59597da4d58f9cc61cd3
License: CC0 Creative Commons Zero 1.0
This file contains data from UHPLC-UHRMS analysis in negative mode for each: control radish extract, field dose (Mix1x) pesticide-treated radish extract, 100-times field dose (Mix100x) pesticide-treated radish extract, 100x-metaldehyde-treated (Snacol100x) radish extract, 100x-cypermethrine-treated (Belem100x) radish extract, 100x-azoxystrobine and difenconazole-treated (Scorpion100x) radish extract, including three biological repetitions. The data can be accessed using the free OpenMS software.
Download
POS.zip
ZIP Archive - 3.8 GB - Feb 27, 2026 - 0 Downloads
MD5: 4a8d5cfa2f37608d7f0881bd01f6659a
License: CC0 Creative Commons Zero 1.0
This file contains data from UHPLC-UHRMS analysis in positive mode for each: control radish extract, field dose (Mix1x) pesticide-treated radish extract, 100-times field dose (Mix100x) pesticide-treated radish extract, 100x-metaldehyde-treated (Snacol100x) radish extract, 100x-cypermethrine-treated (Belem100x) radish extract, 100x-azoxystrobine and difenconazole-treated (Scorpion100x) radish extract, including three biological repetitions. The data can be accessed using the free OpenMS software.
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